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Carbohydrate Microarrays as Tools in HIV Glycobiology

[ Vol. 13 , Issue. 2 ]

Author(s):

Daniel M. Ratner and Peter H. Seeberger   Pages 173 - 183 ( 11 )

Abstract:


Progress in carbohydrate microarray technology has positioned the glycochip among the expanding set of biophysical tools available to researchers. Synthetically-derived glycochips unite established microarray techniques with the versatility and structural precision of synthetic carbohydrate chemistry. A comprehensive demonstration of carbohydrate microarrays is illustrated by the chip-based study of protein/carbohydrate and protein/glycoprotein interactions as they relate to HIV glycobiology. Composed of a series of high-mannose oligosaccharides, carbohydrate microarrays were prepared utilizing a covalent linking strategy to immobilize synthetically-defined glycans in a uniform orientation. In concert with a simple glycoprotein array, these microarrays were used to establish the individual and competitive binding profiles of five gp120 binding proteins - DC-SIGN, CD4, 2G12 cyanovirin-N, and scytovirin - and established the carbohydrate structural requirements for these interactions.

Keywords:

Cyanovirin,Glycans,Glycobiology,Glycochip,High-mannose,HIV,Microarray,Scytovirin

Affiliation:

, Laboratorium für Organische Chemie, ETH Hönggerberg, HCI F315, Wolfgang-Pauli-Str. 10, CH-8093,Zurich, Switzerland.



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